Duke University Biochemistry Durham, NC
Overview There are approximately 5,200 graduate students enrolled at Duke University. The University Program in Biological Chemistry currently enrolls 23 students and supports 10 students. The Location and Community Programs of Study and Degree Requirements The biological chemistry program is designed to provide training to students in the synthetic and mechanistic aspects of the interface between chemistry and biology. Specializations include carbohydrate, lipid, nucleic acid, and protein synthesis; molecular recognition between biomolecules; and mechanisms of catalytic processes involving proteins and nucleic acids and their associated cofactors. Course offerings, including a core focusing on the synthesis of biological macromolecules and mechanisms of enzymatic cofactors, are aimed at providing significant cross-training between chemistry and biology and developing a common language among students in different disciplines. Laboratory rotations begin in the summer and continue in the fall and (in some cases) spring semesters of the first year of study. Facilities & Resources Expenses and Aid Financial Aid: Housing/Living Expenses: How to Apply Who to Contact Telephone: 919-681-8825 E-mail: blc@biochem.duke.edu http://blc.duke.edu The Faculty • Michael Been, Professor (Biochemistry); Ph.D., Washington (Seattle), 1982. Cis- and trans-acting ribozymes from a human pathogen, hepatitis delta virus. Trends Biochem. Sci. 19:251-6, 1994. • Patrick Casey, Professor (Pharmacology and Cancer Biology); Ph.D., Brandeis, 1986. Interaction of prenylcysteine methyl esters with the multidrug resistance transporter. J. Biol. Chem. 269:15973-6, 1994 (with Zhang, Sachs, Fine, and Casey). • Allin Crumbliss, Professor (Chemistry); Ph.D., Northwestern, 1969. pH induced active ("uphill") liquid membrane transport of ferrioxamine B by the ionizable iophore lasalocid. Inorg. Chem. 38:3248, 1999 (with Spasojevic). • Michael Fitzgerald, Assistant Professor (Chemistry); Ph.D., Wisconsin, 1994. A quantitative, high-throughput screen for protein stability. Proc. Nat. Acad. Sci. U.S.A. 97(15):8296-301, 2001 (with Ghaemmaghami). • Katherine Franz, Assistant Professor (Chemistry); Ph.D., MIT, 2000. Pentacoordinate cobalt(III) thiolate and nitrosyl tropocoronand compounds. Inorg. Chem. 40:3774-80, 2001 (with Doerrer, Spingler, and Lippard). • Timmothy Haystead, Associate Professor (Pharmacology and Cancer Biology); Ph.D., Dundee (Scotland), 1988. Smooth muscle myosin phosphatase-associated kinase induces Ca2+ sensitization via myosin phosphatase inhibition. J. Biol. Chem. 26:23441-6, 2002 (with Borman, MacDonald, Muranyi, and Hartshorne). • Homme Hellinga, Assistant Professor (Biochemistry); Ph.D., Cambridge, 1986. Optimal sequence selection in proteins of known structure by simulated evolution. Proc. Natl. Acad. Sci. U.S.A. 91:5803-7, 1994 (with Richards). • Tao-shih Hsieh, Professor (Biochemistry); Ph.D. Berkeley, 1977. Insertion mutagenesis of Drosophila Topoisomerase II: Probing the structure of eukaryotic topoisomerase II. J. Mol. Biol. 235:436-47, 1994 (with Lee and Linker). • Thomas McIntosh, Associate Professor (Cell Biology); Ph.D., Carnegie-Mellon, 1973. Experimental tests for thermally-induced fluctuations in lipid bilayers. Progress Colloid Polymer Sci. 103:95-106, 1997 (with Simon). • Paul Modrich, J. B. Duke Professor of Biochemistry and the Howard Hughes Institute; Ph.D., Stanford, 1973. Mismatch repair proteins mutS and mutL inhibit RecA-catalyzed strand transfer between diverged DNAs. Proc. Natl. Acad. Sci. U.S.A. 91:3238-41, 1994 (with Worth, Clark, and Radman). • Christopher Newgard, Professor (Pharmacology and Cancer Biology); Ph.D., Texas Southwestern Medical Center, 1984. ®MD+SU¯13®MD-SU¯C NMR isotopomer analysis reveals a connection between pyruvate cycling and glucose-stimulated insulin secretion. Proc. Natl. Acad. Sci. U.S.A. 99:2708-13, 2002 (with Lu et al). • Michael Pirrung, Professor (Chemistry); Ph.D., Berkeley, 1980. Kinetic mechanism and reaction pathway of T. thermophilus isopropylmalate dehydrogenase. J. Org. Chem. 59:2423, 1994 (with Han and Nunn). • Christian Raetz, G. B. Geller Professor and Department Chairman (Biochemistry); Ph.D./M.D., Harvard, 1973. Bacterial endotoxins: Extraordinary lipids that activate eukaryotic signal transduction. J. Bacteriol. 175:5745-53, 1993. • Johannes Rudolph, Assistant Professor (Biochemistry); Ph.D., MIT, 1993. Investigation of the specificity of natural and artificial substrates for human Cdc25A. Anal. Biochem. 289:43-51, 2001 (with Chen). • B. Ramsay Shaw, Professor (Chemistry); Ph.D., Washington (Seattle), 1973. Bisulfite induces tandem double CC-TT mutations in double-stranded DNA. 2 kinetics of cytosine deamination. Biochem. 33:4121-9, 1994 (with Chen and Shaw). • James Siedow, Professor (Biology); Ph.D., Indiana, 1973. Regulation of alternative oxidase kinetics by pyruvate and intermolecular disulfide bond redox status in soybean seedling mitochondria. FEBS Lett. 348:181-4, 1994 (with Umback and Wiskich). • Eric Toone, Professor (Chemistry); Ph.D., Toronto, 1988. Directed evolution of a new catalytic site in 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli. Structure 9:1-9, 2001 (with Mehta et al.). • Ross Widenhoefer, Assistant Professor (Chemistry); Ph.D., Wisconsin-Madison, 1994. Enantioselective diene cyclization/hydrosilylation catalyzed by optically pure palladium bisoxazoline and pyridine-oxazoline complexes. J. Org. Chem. 65:3836-45, 2000 (with Perch and Pei). • John York, Associate Professor (Pharmacology and Cancer Biology); Ph.D., Washington (St. Louis), 1993. Specificity determinants in phosphoinositide dephosphorylation: Crystal structure of an archetypal inositol polyphosphate 5-phosphatase. Cell 105:379-89 2001. |